Nanobiotechnology
Summary
This course concerns modern bioanalytical techniques to investigate biomolecules both in vitro and in vivo, including recent methods to image, track and manipulate single molecules. We cover the basic principles of the respective methods and discuss examples from the current scientific literature.
Content
Techniques to monitor the function of single biomolecules and complexes
- Single molecule fluorescence spectroscopy (FRET, confocal and total internal reflection fluorescence microscopy)
- Force spectroscopy to monitor function of single proteins and cells
- Microscopy beyond the diffraction limit: Super-resolution microscopy
Surface sensors to elucidate and quantify molecular interactions
- Immobilizing biopolymers on surfaces
- Optical & electrical detection techniques
Development and application of microfluidic and nanofluidic sensor devices
- Miniaturization of analytical techniques: Lab on a chip
- Chemical and biochemical sensors
- Next-generation DNA sequencing approaches
Engineered biomolecules to manipulate cells or as drug delivery vehicles
- Nano-containers for drug delivery vectors
- DNA based self-assembly and nanofabrication of complex structures
Keywords
Nanobiotechnology, biophysics, sensors, single-molecule, fluroescence, FRET, drug delivery, DNA origami, lab-on-a-chip, super-resolution microscopy, force spectroscopy
Learning Prerequisites
Required courses
Biochemistry I and II
Molecular and Cellular Biophysics I and II
Important concepts to start the course
Biomolecular absorption and fluorescence
General biochemistry
Learning Outcomes
By the end of the course, the student must be able to:
- Investigate the primary literature of a research field
- Interpret the primary literature of a research field
- Identify an unanswered, tracable problem
- Formulate a specific research question
- Hypothesize testable predictions from the gap identified
- Contextualise the proposed work within the state of the art
- Justify the proposed work's significance and originality
- Choose for the proposed work
- Design experiments capable of distinguishing between hypotheses
- Anticipate the main pitfalls
- Propose alternative strategies and contignency plans
- Present the proposal orally
- Respond to critique constructively
Transversal skills
- Make an oral presentation.
- Write a literature review which assesses the state of the art.
- Use a work methodology appropriate to the task.
- Communicate effectively with professionals from other disciplines.
- Demonstrate the capacity for critical thinking
- Demonstrate a capacity for creativity.
- Take feedback (critique) and respond in an appropriate manner.
Assessment methods
Oral presentation 40%
Final project (research proposal) 60%
Resources
Bibliography
Nanobiotechnology, Niemeyer & Merkin (Wiley 2004)
Introduction to bioMEMS, Folch (CRC press, 2012)
Ressources en bibliothèque
Notes/Handbook
Handouts and literature references distributed in class
Moodle Link
In the programs
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Spring
- Exam form: During the semester (summer session)
- Subject examined: Nanobiotechnology
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 1 Hour(s) per week x 14 weeks
- Type: optional
Reference week
| Mo | Tu | We | Th | Fr | |
| 8-9 | |||||
| 9-10 | |||||
| 10-11 | |||||
| 11-12 | |||||
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| 17-18 | |||||
| 18-19 | |||||
| 19-20 | |||||
| 20-21 | |||||
| 21-22 |
Légendes:
Lecture
Exercise, TP
Project, Lab, other