Multivariate statistics in R
Summary
Data required for ecosystem assessment is typically multidimensional. Multivariate statistical tools allow us to summarize and model multiple ecological parameters. This course provides a conceptual introduction and guidelines for the use of multivariate statistical tools using the R platform.
Content
- Biological and environmental data, multidimensional data, and the R platform
- Resemblance, similarity and dependence measures
- Unsupervised and supervised clustering techniques
- Ordination techniques (PCA, CA, PCoA, NMDS)
- Constrained ordination (RDA, CCA, db-RDA)
- Statistical tests for multivariable responses (anosim, betadisper)
Keywords
Multivariable analysis, statistics for ecological data sets, ordination, clustering
Learning Outcomes
By the end of the course, the student must be able to:
- Explore multivariate datasets
- Select appropriately the methods for multivariate data analysis
- Explain the basic principles of various tools
- Interpret obtained results
- Apply methods in exercices and in a personal project
Transversal skills
- Communicate effectively with professionals from other disciplines.
Teaching methods
Lectures and computer exercises. Personal projects.
Expected student activities
- Active participation in lectures and excercises.
- Application of methods to example and a personal dataset
- Presentation of results (oral and written)
Assessment methods
- hand-in exercises (individual) - 50%
- oral presentation (group work) - 20%
- written report (group work) - 30%
Supervision
| Office hours | Yes |
| Assistants | Yes |
| Forum | Yes |
| Others | moodle |
In the programs
- Semester: Fall
- Exam form: Written (winter session)
- Subject examined: Multivariate statistics in R
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 2 Hour(s) per week x 14 weeks
- Type: optional
- Semester: Fall
- Exam form: Written (winter session)
- Subject examined: Multivariate statistics in R
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 2 Hour(s) per week x 14 weeks
- Type: optional
- Exam form: Written (winter session)
- Subject examined: Multivariate statistics in R
- Courses: 2 Hour(s) per week x 14 weeks
- Exercises: 2 Hour(s) per week x 14 weeks
- Type: optional
Reference week
| Mo | Tu | We | Th | Fr | |
| 8-9 | |||||
| 9-10 | |||||
| 10-11 | |||||
| 11-12 | |||||
| 12-13 | |||||
| 13-14 | |||||
| 14-15 | |||||
| 15-16 | |||||
| 16-17 | |||||
| 17-18 | |||||
| 18-19 | |||||
| 19-20 | |||||
| 20-21 | |||||
| 21-22 |
Légendes:
Lecture
Exercise, TP
Project, Lab, other